Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_10742695_10742921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10742695 - 10742921

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCGGTGGG

5'SS Class:

major

3'SS Sequence:

CTTTGCCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTCAC

U12 Branch Point Sequence:

GTAGGTTCACCT

Flanking Amino Acid:

ALEFIKYVCKVLSLDANITN

Intron Amino Acid Position:

2110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.4

58.8

42.9

Major BPS

57.1

0.18

1.3

63.1

44.5

Major PPT

79.4

0.66

0.8

73.7

31.3

Minor 5ss

26.1

-2.7

3.1

31.9

42.5

Minor BPS

-0.6

2.1

57.23

45.5

Associated Gene:

Gene:

POLE

Ensembl Gene ID:

ENSAPLG00000009950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021339

10717508 - 10744851

27344

ENSAPLT00000010455

10717508 - 10744851

27344