Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_10747059_10747205_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10747059 - 10747205

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTTGTGT

5'SS Class:

major

3'SS Sequence:

CTCCCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

CGCTCCTTGATG

Flanking Amino Acid:

GEDFTELAEKGGVIGVIITW

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

39.9

Major BPS

71.5

0.53

1.1

43.2

Major PPT

74.6

0.55

0.8

68.4

31.8

Minor 5ss

39.2

-1.2

3.3

48.2

Minor BPS

62.8

0.26

1.4

58.77

43.6

Associated Gene:

Gene:

P2RX2

Ensembl Gene ID:

ENSAPLG00000010928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011474

10745614 - 10750122

4509