Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_10748344_10748647_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10748344 - 10748647

Intron Length:

304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

CGTCCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATGAA

U12 Branch Point Sequence:

TCCCAATGAAAC

Flanking Amino Acid:

PAQTMETCPEGRAVATATCS

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

55.3

0.13

1.1

47.4

Major PPT

72.1

0.5

0.9

65.1

36.2

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

41.6

-0.6

1.8

48.59

40.3

Associated Gene:

Gene:

P2RX2

Ensembl Gene ID:

ENSAPLG00000010928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011474

10745614 - 10750122

4509