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Intron Name: Anas_platyrhynchos_platyrhynchos_16_10780046_10781367_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10780046 - 10781367

Intron Length:

1322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

ACTGTCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAG

U12 Branch Point Sequence:

GCGTGTGGCACT

Flanking Amino Acid:

TVHLSRSNSFMEPEAVEQPQ

Intron Amino Acid Position:

763

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

38.3

Major BPS

46.9

-0.1

1.7

42.8

49.4

Major PPT

77.2

0.61

0.9

69.9

35.9

Minor 5ss

33.4

-1.9

3.4

46.1

43.6

Minor BPS

-1.1

2.4

48.33

Associated Gene:

Gene:

SMTN

Ensembl Gene ID:

ENSAPLG00000012665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013207

10772093 - 10797037

24945

ENSAPLT00000040843

10772093 - 10797037

24945

ENSAPLT00000029245

10772093 - 10797037

24945