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Intron Name: Anas_platyrhynchos_platyrhynchos_16_10853138_10857612_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10853138 - 10857612

Intron Length:

4475

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCAGGAAAA

5'SS Class:

weak_major

3'SS Sequence:

CGAGACGGGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTACTAC

U12 Branch Point Sequence:

CTACTACTACGA

Flanking Amino Acid:

APAACEWQADWEA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.17

1.4

54.4

42.7

Major BPS

-0.2

1.3

42.2

38.4

Major PPT

38.1

-0.6

1.6

36.8

Minor 5ss

23.3

-3.1

3.9

35.9

41.9

Minor BPS

35.2

-1.1

42.87

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019000

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019799

10852081 - 10857621

5541