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Intron Name: Anas_platyrhynchos_platyrhynchos_16_10883774_10884339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10883774 - 10884339

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

TGTTCTCGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGGAT

U12 Branch Point Sequence:

ATGGGCTTAAGG

Flanking Amino Acid:

GIQNVSTCRLNAPMFISHPH

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

68.6

36.4

Major BPS

62.6

0.31

1.4

63.1

44.4

Major PPT

73.1

0.52

65.7

Minor 5ss

31.2

-2.2

3.2

38.1

40.6

Minor BPS

46.7

-0.3

2.2

52.95

47.8

Associated Gene:

Gene:

SCARB1

Ensembl Gene ID:

ENSAPLG00000013154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013745

10874954 - 10890197

15244

ENSAPLT00000048331

10874954 - 10893236

18283