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Intron Name: Anas_platyrhynchos_platyrhynchos_16_10884459_10886144_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10884459 - 10886144

Intron Length:

1686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGGGGC

5'SS Class:

major

3'SS Sequence:

CTCTCCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TACTGACAAACT

Flanking Amino Acid:

HHALFLDVHPMTGIPMNCSI

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.1

52.3

39.1

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

77.1

0.61

0.9

72.2

32.4

Minor 5ss

23.2

-3.1

3.5

31.4

43.2

Minor BPS

40.9

-0.6

2.4

62.88

46.6

Associated Gene:

Gene:

SCARB1

Ensembl Gene ID:

ENSAPLG00000013154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048331

10874954 - 10893236

18283

ENSAPLT00000013745

10874954 - 10890197

15244