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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1089662_1094886_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1089662 - 1094886

Intron Length:

5225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATCT

5'SS Class:

strong_major

3'SS Sequence:

TCCATTTAACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

GTCCATTTAACT

Flanking Amino Acid:

RIMGEVLREARFAVAFTMKM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

31.3

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

64.4

0.32

59.1

40.8

Minor 5ss

39.9

-1.1

3.2

57.4

46.8

Minor BPS

62.5

0.47

1.5

75.23

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012435

1085082 - 1123678

38597