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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11082709_11087065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11082709 - 11087065

Intron Length:

4357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

ATCTCCTGACCT

Flanking Amino Acid:

KRRNHARKQWEQKFCQRYDQ

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.4

32.7

Major BPS

68.9

0.47

59.2

39.1

Major PPT

79.2

0.66

0.8

69.6

36.7

Minor 5ss

33.9

-1.8

3.3

40.8

45.4

Minor BPS

62.1

0.46

1.8

79.25

42.7

Associated Gene:

Gene:

NCOR2

Ensembl Gene ID:

ENSAPLG00000013606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014215

11051634 - 11170867

119234