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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11088496_11090746_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11088496 - 11090746

Intron Length:

2251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CGGTGCTGACCA

Flanking Amino Acid:

EIIDGLSEQENLEKQMRQLA

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

78.5

0.64

0.7

70.1

30.8

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

43.9

-0.4

2.1

52.46

45.5

Associated Gene:

Gene:

NCOR2

Ensembl Gene ID:

ENSAPLG00000013606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014215

11051634 - 11170867

119234