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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11113920_11122967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11113920 - 11122967

Intron Length:

9048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCACCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAA

U12 Branch Point Sequence:

CTGGCCTTAAAC

Flanking Amino Acid:

TEEEMETAKKGLLEHGRNWS

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

72.3

39.5

Major BPS

65.4

0.38

1.1

67.5

Major PPT

72.4

0.5

0.8

66.1

28.3

Minor 5ss

38.2

-1.3

3.1

50.1

46.5

Minor BPS

63.1

0.39

1.6

67.21

44.4

Associated Gene:

Gene:

NCOR2

Ensembl Gene ID:

ENSAPLG00000013606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014215

11051634 - 11170867

119234