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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11131214_11135706_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11131214 - 11135706

Intron Length:

4493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

GTTTTGTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCGTAA

U12 Branch Point Sequence:

GCCTCCGTAACC

Flanking Amino Acid:

MDEQDAVDKSRLLSPRPSLL

Intron Amino Acid Position:

733

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

47.9

-0.1

1.4

45.6

39.5

Major PPT

74.5

0.55

72.8

42.2

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

0.23

2.1

66.74

Associated Gene:

Gene:

NCOR2

Ensembl Gene ID:

ENSAPLG00000013606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014215

11051634 - 11170867

119234