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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11136918_11140759_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11136918 - 11140759

Intron Length:

3842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCGG

5'SS Class:

major

3'SS Sequence:

TTTTGCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

TGCCGCTGAGCG

Flanking Amino Acid:

SRSPAVGDKEEKSVHFSSIA

Intron Amino Acid Position:

855

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

55.2

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

87.2

0.84

0.7

81.4

30.6

Minor 5ss

28.8

-2.4

3.4

38.1

46.9

Minor BPS

42.2

-0.7

2.1

46.65

45.6

Associated Gene:

Gene:

NCOR2

Ensembl Gene ID:

ENSAPLG00000013606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014215

11051634 - 11170867

119234