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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11142524_11143409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11142524 - 11143409

Intron Length:

886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGTG

5'SS Class:

major

3'SS Sequence:

TTGTGTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTAAAT

U12 Branch Point Sequence:

CAGCCTCCAACC

Flanking Amino Acid:

QPAQEGSILRGTSLGSASGG

Intron Amino Acid Position:

1024

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

63.1

43.4

Major BPS

58.4

0.21

1.2

38.7

Major PPT

0.67

0.9

36.8

Minor 5ss

34.1

-1.8

3.4

38.1

46.8

Minor BPS

44.2

-0.4

1.8

40.2

Associated Gene:

Gene:

NCOR2

Ensembl Gene ID:

ENSAPLG00000013606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014215

11051634 - 11170867

119234