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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11143514_11145825_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11143514 - 11145825

Intron Length:

2312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTCCC

5'SS Class:

major

3'SS Sequence:

GTGGCTTTCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

ACACTGTTAAAT

Flanking Amino Acid:

PITYRGSITHGTPAEVLYKG

Intron Amino Acid Position:

1059

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.3

69.7

41.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

0.2

1.1

55.9

43.7

Minor 5ss

36.9

-1.5

2.9

45.4

35.3

Minor BPS

46.5

-0.1

2.1

61.56

Associated Gene:

Gene:

NCOR2

Ensembl Gene ID:

ENSAPLG00000013606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014215

11051634 - 11170867

119234