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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11164251_11166673_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11164251 - 11166673

Intron Length:

2423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCTT

5'SS Class:

strong_major

3'SS Sequence:

CCGTATCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCGTAT

U12 Branch Point Sequence:

CCTCCCGTATCT

Flanking Amino Acid:

IFNMPAITGAGLISCRSQSV

Intron Amino Acid Position:

2134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

1.1

81.8

38.5

Major BPS

46.6

-0.2

1.4

42.9

40.1

Major PPT

70.4

0.46

0.9

61.1

39.8

Minor 5ss

45.7

-0.5

2.9

67.7

43.2

Minor BPS

47.9

-0

2.3

68.82

47.8

Associated Gene:

Gene:

NCOR2

Ensembl Gene ID:

ENSAPLG00000013606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014215

11051634 - 11170867

119234