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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11166761_11168340_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11166761 - 11168340

Intron Length:

1580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATATG

5'SS Class:

major

3'SS Sequence:

CTTCTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

GCCTTGGTGACG

Flanking Amino Acid:

LEAIIRKALMGGGGKPKIAA

Intron Amino Acid Position:

2163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

75.1

41.1

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

0.88

0.6

84.1

23.9

Minor 5ss

38.3

-1.3

2.9

42.6

44.4

Minor BPS

38.7

-1

2.5

41.72

43.8

Associated Gene:

Gene:

NCOR2

Ensembl Gene ID:

ENSAPLG00000013606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014215

11051634 - 11170867

119234