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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11186229_11188100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11186229 - 11188100

Intron Length:

1872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACAGATG

5'SS Class:

major

3'SS Sequence:

CTGTCCTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

GTGCTCATGACA

Flanking Amino Acid:

EVSPEPVQEIRCNSEVKYDS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

66.9

44.1

Major BPS

79.7

0.74

79.6

35.6

Major PPT

74.4

0.55

0.8

66.3

35.8

Minor 5ss

34.2

-1.8

3.5

47.9

47.8

Minor BPS

49.8

-0

1.6

61.33

38.3

Associated Gene:

Gene:

RFLNA

Ensembl Gene ID:

ENSAPLG00000013994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014569

11185895 - 11188174

2280