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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11232112_11238774_F

Intron Information:

Intron Rank:

150296

Intron Class:

major

Intron Phase:

Intron Coordinates:

11232112 - 11238774

Intron Length:

6663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TTTGTTTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.8

43.8

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

87.8

0.85

0.7

83.5

31.6

Minor 5ss

30.1

-2.3

2.9

41.8

Minor BPS

58.6

0.26

1.8

73.92

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038195

11217991 - 11264729

46739