Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_11371033_11371494_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11371033 - 11371494

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGATTAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AGTATCTTAACT

Flanking Amino Acid:

CKAVDLHTLFKEDRAAAKKK

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

87.3

26.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

74.6

0.55

0.9

70.8

38.9

Minor 5ss

40.1

-1.1

2.8

53.2

37.3

Minor BPS

75.1

0.87

1.2

83.96

36.2

Associated Gene:

Gene:

DNAH10

Ensembl Gene ID:

ENSAPLG00000014113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021615

11362692 - 11374105

11414

ENSAPLT00000014736

11323140 - 11378433

55294