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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11423357_11423588_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11423357 - 11423588

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGGGGG

5'SS Class:

major

3'SS Sequence:

GTTTCTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAA

U12 Branch Point Sequence:

GCCAGTTGAACT

Flanking Amino Acid:

LGFTGMTPVQSATIPLFMSN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.3

59.5

42.5

Major BPS

63.2

0.33

1.1

55.1

42.1

Major PPT

85.9

0.81

0.8

77.4

36.9

Minor 5ss

-3

3.2

29.6

43.2

Minor BPS

45.6

-0.2

1.9

57.78

45.1

Associated Gene:

Gene:

DDX55

Ensembl Gene ID:

ENSAPLG00000015032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015732

11417158 - 11423696

6539