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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11454730_11458751_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11454730 - 11458751

Intron Length:

4022

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCT|GCCAGGCAT

5'SS Class:

weak_major

3'SS Sequence:

GCACGGCCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATGCAG

U12 Branch Point Sequence:

GCATGCAGCACG

Flanking Amino Acid:

VFTVPEEEEEDEEEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.8

0.04

1.5

54.2

42.9

Major BPS

42.5

-0.4

1.6

52.7

43.2

Major PPT

50.1

1.1

42.7

38.4

Minor 5ss

20.4

-3.4

40.2

45.4

Minor BPS

35.9

-1.2

2.3

38.76

43.8

Associated Gene:

Gene:

RILPL2

Ensembl Gene ID:

ENSAPLG00000015655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016310

11454715 - 11462205

7491