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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1150234_1151295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1150234 - 1151295

Intron Length:

1062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

CTGCAGCTAACT

Flanking Amino Acid:

GQELGMTTIQILSPLSDAIL

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

42.5

-0.4

2.4

63.06

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027628

1144737 - 1367322

222586

ENSAPLT00000040969

1144737 - 1367322

222586

ENSAPLT00000024447

1144737 - 1372582

227846

ENSAPLT00000037047

1144737 - 1430941

286205

ENSAPLT00000022168

1144737 - 1395385

250649

ENSAPLT00000034307

1144737 - 1430941

286205

ENSAPLT00000012672

1144737 - 1397561

252825

ENSAPLT00000028392

1144737 - 1351737

207001

ENSAPLT00000048397

1144737 - 1434770

290034