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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1151410_1151490_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1151410 - 1151490

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGAGTG

5'SS Class:

major

3'SS Sequence:

TTCTGACTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

AGCTACTTACTG

Flanking Amino Acid:

GCTLQYQHAMIDITDLVSDF

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.1

62.7

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

70.5

0.46

39.9

Minor 5ss

33.1

-1.9

3.6

43.5

46.1

Minor BPS

-0.2

1.9

51.25

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040969

1144737 - 1367322

222586

ENSAPLT00000028392

1144737 - 1351737

207001

ENSAPLT00000022168

1144737 - 1395385

250649