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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11653334_11654858_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11653334 - 11654858

Intron Length:

1525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTTAC

U12 Branch Point Sequence:

TTTACTCCAAGC

Flanking Amino Acid:

SWNAYPYTRTRYTCPFVEKF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

77.9

36.7

Major BPS

0.27

1.2

55.4

41.7

Major PPT

83.2

0.75

0.8

80.3

31.8

Minor 5ss

37.2

-1.4

3.4

56.5

47.6

Minor BPS

-0.3

2.1

64.09

41.4

Associated Gene:

Gene:

PITPNM2

Ensembl Gene ID:

ENSAPLG00000016158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047447

11637974 - 11702043

64070

ENSAPLT00000016882

11637974 - 11702043

64070