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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11675601_11676635_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11675601 - 11676635

Intron Length:

1035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTCAAA

U12 Branch Point Sequence:

CCCGCCCCACTT

Flanking Amino Acid:

SQEGMSFNGQVCLVGDCVGG

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

64.9

42.8

Major BPS

47.5

-0.1

1.3

54.5

39.1

Major PPT

86.2

0.81

0.8

84.4

30.5

Minor 5ss

31.8

-2.1

37.6

47.1

Minor BPS

38.2

-0.8

47.68

45.5

Associated Gene:

Gene:

PITPNM2

Ensembl Gene ID:

ENSAPLG00000016158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047447

11637974 - 11702043

64070

ENSAPLT00000016882

11637974 - 11702043

64070