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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11677253_11682134_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11677253 - 11682134

Intron Length:

4882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTGTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTGTCTTTATTT

Flanking Amino Acid:

TIKQHQAFLSSLHSSVLRND

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

73.3

0.53

0.9

65.1

41.2

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

69.5

0.69

1.5

83.25

38.8

Associated Gene:

Gene:

PITPNM2

Ensembl Gene ID:

ENSAPLG00000016158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016882

11637974 - 11702043

64070