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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11682842_11690620_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11682842 - 11690620

Intron Length:

7779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTCAACTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AATATTTTGATT

Flanking Amino Acid:

PLGDGNSAVLADVVQSHGAV

Intron Amino Acid Position:

787

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

72.3

39.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

75.4

0.57

0.9

69.7

36.2

Minor 5ss

34.1

-1.8

2.9

36.4

40.6

Minor BPS

58.3

0.34

1.2

69.84

Associated Gene:

Gene:

PITPNM2

Ensembl Gene ID:

ENSAPLG00000016158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047447

11637974 - 11702043

64070

ENSAPLT00000016882

11637974 - 11702043

64070