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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11690786_11694805_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11690786 - 11694805

Intron Length:

4020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

CTTTTCCTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

TGCACATGAACC

Flanking Amino Acid:

DSYTASNIANIAAKWWGTKR

Intron Amino Acid Position:

842

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

74.8

0.62

39.8

Major PPT

84.9

0.78

0.7

77.7

31.1

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

50.3

-0

1.8

62.57

Associated Gene:

Gene:

PITPNM2

Ensembl Gene ID:

ENSAPLG00000016158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016882

11637974 - 11702043

64070

ENSAPLT00000047447

11637974 - 11702043

64070