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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11699960_11701278_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11699960 - 11701278

Intron Length:

1319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGCCTG

5'SS Class:

major

3'SS Sequence:

TCTCTCACTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

CTTTCTCTCACT

Flanking Amino Acid:

ANFLKSLITDLHMRIHAAYG

Intron Amino Acid Position:

1131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

63.6

48.1

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

80.2

0.68

0.8

74.2

29.3

Minor 5ss

42.9

-0.8

3.1

55.9

41.9

Minor BPS

56.1

0.27

2.1

80.09

42.2

Associated Gene:

Gene:

PITPNM2

Ensembl Gene ID:

ENSAPLG00000016158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047447

11637974 - 11702043

64070

ENSAPLT00000035941

11692152 - 11702043

9892

ENSAPLT00000016882

11637974 - 11702043

64070