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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11707216_11707443_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11707216 - 11707443

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGGGG

5'SS Class:

major

3'SS Sequence:

TCTCCCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TGTGCTCTGAGG

Flanking Amino Acid:

SKERHKEINKQATRGDGLAF

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.2

58.7

46.2

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

84.8

0.78

0.7

76.5

32.1

Minor 5ss

34.2

-1.8

3.6

46.8

48.5

Minor BPS

43.9

-0.6

51.55

43.3

Associated Gene:

Gene:

ARL6IP4

Ensembl Gene ID:

ENSAPLG00000023108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019683

11707159 - 11709302

2144