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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11712153_11712631_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11712153 - 11712631

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGACTC

5'SS Class:

major

3'SS Sequence:

CTCTCTGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAG

U12 Branch Point Sequence:

CTGCTCCCAGCT

Flanking Amino Acid:

GRPNSMNNYGVLLNEIGMDE

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

60.8

44.4

Major BPS

44.5

-0.3

1.6

55.8

41.7

Major PPT

71.4

0.48

68.1

37.5

Minor 5ss

34.7

-1.7

3.5

42.6

44.5

Minor BPS

41.6

-0.5

58.04

44.7

Associated Gene:

Gene:

OGFOD2

Ensembl Gene ID:

ENSAPLG00000001967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001964

11710950 - 11715434

4485

ENSAPLT00000044657

11710950 - 11715834

4885