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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11712757_11713603_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11712757 - 11713603

Intron Length:

847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

ATTTCCCCAGCT

Flanking Amino Acid:

GLLRYTESFSDKRIYRLPVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

77.5

30.5

Major BPS

0.47

1.2

61.1

45.5

Major PPT

79.1

0.66

0.9

76.4

32.2

Minor 5ss

33.1

-1.9

42.8

44.4

Minor BPS

52.4

0.15

2.1

80.11

41.3

Associated Gene:

Gene:

OGFOD2

Ensembl Gene ID:

ENSAPLG00000001967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044657

11710950 - 11715834

4885

ENSAPLT00000001964

11710950 - 11715434

4485