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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11713704_11714442_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11713704 - 11714442

Intron Length:

739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGACACT

5'SS Class:

major

3'SS Sequence:

CCCTGGATGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

CTTCCCTGGATG

Flanking Amino Acid:

RKHPEVYVLQDSFLAPEFLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

68.7

42.2

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

58.4

0.19

1.1

49.7

42.8

Minor 5ss

-1.1

3.3

58.1

46.3

Minor BPS

54.9

0.01

1.6

60.73

41.4

Associated Gene:

Gene:

OGFOD2

Ensembl Gene ID:

ENSAPLG00000001967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044657

11710950 - 11715834

4885

ENSAPLT00000001964

11710950 - 11715434

4485