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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11750781_11751925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11750781 - 11751925

Intron Length:

1145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGACA

5'SS Class:

strong_major

3'SS Sequence:

CCATATTTGATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TATTCCATATTT

Flanking Amino Acid:

EGAKIEEDTENMAENFLDGE

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

74.2

35.8

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

64.4

0.32

60.6

39.9

Minor 5ss

32.6

-2

3.1

41.2

44.8

Minor BPS

61.7

0.45

1.9

82.37

38.9

Associated Gene:

Gene:

VPS37B

Ensembl Gene ID:

ENSAPLG00000023690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040718

11749588 - 11755329

5742

ENSAPLT00000031030

11747984 - 11752423

4440