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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11762636_11763027_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11762636 - 11763027

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAGGTACC

5'SS Class:

major

3'SS Sequence:

CTTCCGACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

GTGTCTCTAACA

Flanking Amino Acid:

KAVGWGATQLVESADRVVLH

Intron Amino Acid Position:

876

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.2

63.5

39.2

Major BPS

72.3

0.55

73.3

28.9

Major PPT

73.5

0.53

0.9

66.3

34.3

Minor 5ss

37.6

-1.4

47.1

41.5

Minor BPS

63.8

0.43

1.7

72.8

39.1

Associated Gene:

Gene:

HIP1R

Ensembl Gene ID:

ENSAPLG00000002663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002800

11760791 - 11776026

15236