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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11765204_11765337_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11765204 - 11765337

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGAGTGGA

5'SS Class:

major

3'SS Sequence:

GTCCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCACAG

U12 Branch Point Sequence:

CGCCACCGACCT

Flanking Amino Acid:

SHLAPTDHADRLTETCRDCG

Intron Amino Acid Position:

718

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.3

59.7

41.3

Major BPS

45.5

-0.2

1.5

54.7

43.1

Major PPT

73.8

0.54

0.8

65.2

36.2

Minor 5ss

28.5

-2.5

3.1

35.6

41.4

Minor BPS

-0.9

1.9

48.93

43.4

Associated Gene:

Gene:

HIP1R

Ensembl Gene ID:

ENSAPLG00000002663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002800

11760791 - 11776026

15236