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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11767678_11767767_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11767678 - 11767767

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTGCA

5'SS Class:

major

3'SS Sequence:

TCACCCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GTGTTCTCACCC

Flanking Amino Acid:

RSLRLCAEAEKKANATEIRY

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

68.8

36.4

Major BPS

0.87

0.8

85.6

Major PPT

72.3

0.5

0.8

62.4

34.4

Minor 5ss

33.3

-1.9

3.4

40.8

39.8

Minor BPS

50.2

-0

1.8

62.78

42.8

Associated Gene:

Gene:

HIP1R

Ensembl Gene ID:

ENSAPLG00000002663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002800

11760791 - 11776026

15236