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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11768870_11768956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11768870 - 11768956

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCGGG

5'SS Class:

major

3'SS Sequence:

TTCCCCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAA

U12 Branch Point Sequence:

TCCCCTTCAAGC

Flanking Amino Acid:

HRDRFHEQFRSLKSFFKKAS

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.3

49.1

47.6

Major BPS

65.8

0.39

1.1

69.2

36.3

Major PPT

81.9

0.72

0.7

73.1

31.7

Minor 5ss

40.2

-1.1

3.5

48.2

Minor BPS

47.5

-0.2

1.8

55.34

43.3

Associated Gene:

Gene:

HIP1R

Ensembl Gene ID:

ENSAPLG00000002663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002800

11760791 - 11776026

15236