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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11771075_11771383_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11771075 - 11771383

Intron Length:

309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTTCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAGAT

U12 Branch Point Sequence:

TGTCTCTTCATC

Flanking Amino Acid:

SNIREVGDLWGHLHDRYGQL

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

71.1

40.4

Major BPS

61.5

0.29

1.1

56.9

40.5

Major PPT

75.1

0.57

0.9

74.2

35.2

Minor 5ss

32.6

-2

3.1

35.3

41.4

Minor BPS

56.6

0.19

1.7

37.8

Associated Gene:

Gene:

HIP1R

Ensembl Gene ID:

ENSAPLG00000002663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002800

11760791 - 11776026

15236