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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11771441_11771645_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11771441 - 11771645

Intron Length:

205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTGCAT

U12 Branch Point Sequence:

TTGCTCCCACTT

Flanking Amino Acid:

HKVLRDGHPNVLQDCQRYRS

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

83.4

Major BPS

57.3

0.18

1.6

71.4

45.1

Major PPT

70.3

0.46

0.8

62.1

34.8

Minor 5ss

35.6

-1.6

3.5

53.7

43.8

Minor BPS

42.5

-0.4

61.78

42.5

Associated Gene:

Gene:

HIP1R

Ensembl Gene ID:

ENSAPLG00000002663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002800

11760791 - 11776026

15236