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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11797741_11799548_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11797741 - 11799548

Intron Length:

1808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGCTGAAG

5'SS Class:

weak_major

3'SS Sequence:

GCAAGCTGCTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTAAA

U12 Branch Point Sequence:

TGGCACTAAAGC

Flanking Amino Acid:

YPLRVLYCGGKDLAKHHCAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.6

0.13

1.1

52.4

40.2

Major BPS

65.2

0.38

0.9

65.5

27.9

Major PPT

50.5

0.01

46.5

41.2

Minor 5ss

26.9

-2.7

3.2

30.1

37.2

Minor BPS

44.2

-0.4

2.1

53.47

43.8

Associated Gene:

Gene:

DENR

Ensembl Gene ID:

ENSAPLG00000003750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003848

11794246 - 11799658

5413