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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11835613_11835725_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11835613 - 11835725

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

GCTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

GGTGTAATACTT

Flanking Amino Acid:

FLILYVEPLPIIFQITPLNV

Intron Amino Acid Position:

934

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.5

35.5

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

0.83

0.7

84.6

30.3

Minor 5ss

40.6

-1.1

2.8

58.6

39.3

Minor BPS

39.7

-0.7

54.97

Associated Gene:

Gene:

ATP2A2

Ensembl Gene ID:

ENSAPLG00000004659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039620

11835343 - 11873951

38609

ENSAPLT00000004899

11835343 - 11873951

38609