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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11837552_11837986_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11837552 - 11837986

Intron Length:

435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

AAGTTCACAACG

Flanking Amino Acid:

WLFFRYLAIGCYVGAATVGA

Intron Amino Acid Position:

821

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.8

34.5

Major BPS

68.5

0.46

75.3

29.8

Major PPT

74.4

0.55

72.6

Minor 5ss

39.9

-1.1

2.9

56.1

41.4

Minor BPS

-0.3

1.8

52.15

Associated Gene:

Gene:

ATP2A2

Ensembl Gene ID:

ENSAPLG00000004659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004899

11835343 - 11873951

38609

ENSAPLT00000039620

11835343 - 11873951

38609