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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11839662_11840957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11839662 - 11840957

Intron Length:

1296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTTA

5'SS Class:

strong_major

3'SS Sequence:

TGTATTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TGTGCTAAAACT

Flanking Amino Acid:

EDSSNFINYETNLTFVGCVG

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

80.1

0.68

41.9

Minor 5ss

43.8

-0.7

2.8

58.6

45.8

Minor BPS

49.2

0.02

73.24

43.7

Associated Gene:

Gene:

ATP2A2

Ensembl Gene ID:

ENSAPLG00000004659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039620

11835343 - 11873951

38609

ENSAPLT00000004899

11835343 - 11873951

38609