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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11841238_11841354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11841238 - 11841354

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTTTGTTAA

5'SS Class:

major

3'SS Sequence:

TTGTTAGTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAA

U12 Branch Point Sequence:

ACTTTGTTAGTT

Flanking Amino Acid:

NKPSRTSMSKIKCCGAPEGV

Intron Amino Acid Position:

511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.2

34.1

Major BPS

57.2

0.18

1.1

58.3

34.3

Major PPT

0.43

1.2

72.4

41.9

Minor 5ss

44.4

-0.6

2.5

54.7

42.9

Minor BPS

48.4

-0

2.2

69.24

42.6

Associated Gene:

Gene:

ATP2A2

Ensembl Gene ID:

ENSAPLG00000004659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039620

11835343 - 11873951

38609