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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11841691_11842227_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11841691 - 11842227

Intron Length:

537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

GTGTTAACTAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

TTTGTGTTAACT

Flanking Amino Acid:

CNDSSLDYNEAKGVYEKVGE

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.5

27.8

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

59.5

0.22

1.2

57.9

41.5

Minor 5ss

37.7

-1.4

2.7

44.2

Minor BPS

64.4

0.53

2.1

86.99

39.2

Associated Gene:

Gene:

ATP2A2

Ensembl Gene ID:

ENSAPLG00000004659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004899

11835343 - 11873951

38609

ENSAPLT00000039620

11835343 - 11873951

38609