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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11842331_11844841_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11842331 - 11844841

Intron Length:

2511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

ATCCTCTGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CCTTTTTCATCC

Flanking Amino Acid:

TGSTYAPMGEVHKDDKLIKC

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

78.2

36.4

Major BPS

100

1.24

0.5

100

Major PPT

53.1

0.07

1.2

56.1

38.5

Minor 5ss

40.6

-1

3.4

45.5

Minor BPS

47.8

-0.1

1.8

57.16

42.4

Associated Gene:

Gene:

ATP2A2

Ensembl Gene ID:

ENSAPLG00000004659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039620

11835343 - 11873951

38609

ENSAPLT00000004899

11835343 - 11873951

38609