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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11848082_11849001_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11848082 - 11849001

Intron Length:

920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TTATGTACATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTCCCTTTATGT

Flanking Amino Acid:

NQDKKNMLFSGTNIAAGKAM

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

72.1

40.1

Major BPS

74.6

0.61

1.4

34.5

Major PPT

65.8

0.36

40.9

Minor 5ss

44.8

-0.6

2.9

68.2

42.5

Minor BPS

52.6

0.16

1.9

72.72

44.5

Associated Gene:

Gene:

ATP2A2

Ensembl Gene ID:

ENSAPLG00000004659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039620

11835343 - 11873951

38609

ENSAPLT00000004899

11835343 - 11873951

38609