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Intron Name: Anas_platyrhynchos_platyrhynchos_16_11849088_11850879_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11849088 - 11850879

Intron Length:

1792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGTT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTATCTTCATTT

Flanking Amino Acid:

TLRVDQSILTGESVSVIKHT

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

80.7

31.7

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

77.2

0.61

0.8

Minor 5ss

42.5

-0.8

3.5

64.3

47.2

Minor BPS

0.3

1.8

76.89

40.1

Associated Gene:

Gene:

ATP2A2

Ensembl Gene ID:

ENSAPLG00000004659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039620

11835343 - 11873951

38609

ENSAPLT00000004899

11835343 - 11873951

38609